(1)国家自然基金重点项目(主持):线粒体稳态调控与天然免疫互作的机制研究(2021-2025)

(2)科技部重点研发计划(骨干):线粒体质量控制和溶酶体稳态维持的蛋白质机器及其在神经退行性疾病发生中的作用(2019-2024)

(3)国家自然基金重大研究计划培育项目(主持):脂代谢影响线粒体稳态的分子机制及其在非酒精性脂肪肝病发生过程中的重要作用(2018-2020)

(4)国家自然基金面上项目(主持):细胞自噬关键膜蛋白ATG9运输的分子调控(2018-2020)

(5)国家自然基金面上项目(主持):FUNDC1与LC3相互作用结构域在线粒体自噬调控中的关键作用(2014-2018)

(6)国家自然基金面上项目(主持):SDHB在线粒体能量代谢和三羧酸循环中的关键作用(2012-2016)

(7)天津市自然基金重点项目(主持):Beclin-1调控细胞自噬和细胞凋亡转换功能研究(2010-2013)

(8)科技部973(骨干):基因组稳定性和细胞周期调控相关蛋白质群的功能及作用机制研究(2010-2014)

(9)科技部973(骨干):肿瘤和免疫细胞相互作用过程中蛋白质功能研究(2008-2012)

(1)国家自然基金重点项目(主持):线粒体稳态调控与天然免疫互作的机制研究(2021-2025)

(2)科技部重点研发计划(骨干):线粒体质量控制和溶酶体稳态维持的蛋白质机器及其在神经退行性疾病发生中的作用(2019-2024)

(3)国家自然基金重大研究计划培育项目(主持):脂代谢影响线粒体稳态的分子机制及其在非酒精性脂肪肝病发生过程中的重要作用(2018-2020)

(4)国家自然基金面上项目(主持):细胞自噬关键膜蛋白ATG9运输的分子调控(2018-2020)

(5)国家自然基金面上项目(主持):FUNDC1与LC3相互作用结构域在线粒体自噬调控中的关键作用(2014-2018)

(6)国家自然基金面上项目(主持):SDHB在线粒体能量代谢和三羧酸循环中的关键作用(2012-2016)

(7)天津市自然基金重点项目(主持):Beclin-1调控细胞自噬和细胞凋亡转换功能研究(2010-2013)

(8)科技部973(骨干):基因组稳定性和细胞周期调控相关蛋白质群的功能及作用机制研究(2010-2014)

(9)科技部973(骨干):肿瘤和免疫细胞相互作用过程中蛋白质功能研究(2008-2012)

发表论文：

(1)Geng G, Liu J, Xu C, Pei Y, Chen L, Mu C, Wang D, Gao J, Li Y, Liang J, Zhao T, Zhang C, Zhou J, Chen Q, Zhu Y*, Shi L* (2021) Receptor-mediated mitophagy regulates EPO production and protects against renal anemia.eLife10 (*通讯作者, IF=7.08)

(2)Geng G, Xu C, Peng N, Li Y, Liu J, Wu J, Liang J, Zhu Y*, Shi L* (2021) PTBP1 is necessary for dendritic cells to regulate T-cell homeostasis and antitumour immunity. Immunology 163: 74-85  (*通讯作者, IF=5.016)

(3)Ma K, Chen G, Li W, Kepp O, Zhu Y*, Chen Q* (2020) Mitophagy, Mitochondrial Homeostasis, and Cell Fate. Frontiers in cell and developmental biology 8: 467 (review, IF=5.210,他引26)

(4)Ma K, Zhang Z, Chang R, Cheng H, Mu C, Zhao T, Chen L, Zhang C, Luo Q, Lin J, Zhu Y*, Chen Q*. Dynamic PGAM5 multimers dephosphorylate BCL-xL or FUNDC1 to regulate mitochondrial and cellular fate. Cell death and differentiation 2020, 27(3): 1036-1051. (*通讯作者, IF=8.086,他引18)

(5)Ma B, Cheng H, Mu C, Geng G, Zhao T, Luo Q, Liu Q, Gao R, Ma K, Han J, Chen L, Zhu Y*, Chen Q*. The SIAH2-NRF1 axis spatially regulates tumor microenvironment remodeling for tumor progression. Nature Communications 2019, 10:1034. (*通讯作者, IF=12.353,他引22)

(6)Zhou C, Ma K, Gao R, Mu C, Chen L, Liu Q, Luo Q, Feng D, Zhu Y*, Chen Q*. Regulation of mATG9 trafficking by Src- and ULK1-mediated phosphorylation in basal and starvation-induced autophagy. Cell Research 2017, 27(2):184-201. (*通讯作者, IF=15.606,他引99)

(7)Ma B, ChenY, Chen L, Cheng H, Mu C, Li J, Gao R, Zhou C, Cao L, Liu J, Zhu Y*, Chen Q*, Wu S*.Hypoxia regulates Hippo signaling through the SIAH2 ubiquitin E3 ligase. Nature Cell Biology 2015 17(1): 95-103(*通讯作者, IF=20.060,他引167)

(8)Chen G, Han Z, Feng D, Chen Y, Chen L, Zhou C, Cai Y,Fu C, Duan L, Wang X, Liu X, Shen Y, Zhu Y*, Chen Q*. A regulatory signaling loop comprising the PGAM5 phosphatase and CK2 controls receptor-mediated mitophagy.Molecular Cell 2014, 54(3):362-77(*通讯作者,IF=15.28,他引304)

(9)Ma B, Cheng H, Gao R, Mu C, Chen L, Wu S, Chen Q, Zhu Y*. Zyxin-Siah2-Lats2 axis mediates cooperation between Hippo and TGF-beta signalling pathways. Nature Communications2016, 7:11123. (*独立通讯作者, IF=12.124,他引59)

(10)Kuang Y, Ma K, Zhou C, Ding P, Zhu,Y*, Chen Q*, Xia B*. Structural basis for the phosphorylation of FUNDC1 LIR as a molecular switch of mitophagy. Autophagy2016, 12(12):2363-2373.(*通讯作者, IF=9.018,他引37)

(11)Li J, Qi W, Chen G, Fenf D, Liu J, Ma B, Zhou C, Mu C, Zhang W, Chen Q*, Zhu Y*. Mitochondrial outer-membrane E3 ligase MUL1 ubiquitinates ULK1 and regulates selenite-induced mitophagy. Autophagy 2015,11: 1216-1229. (*通讯作者, IF=11.423,他引92)

(12)Song P, Li S, Wu H, Gao R, Rao G, Wang D, Chen Z, Ma B, Wang H, Sui N, Deng, H, Zhang Z, Tang T, Tan Z, Han, Z. Lu T, Zhu Y*, Chen Q*. Parkin promotes proteasomal degradation of p62: implication of selective vulnerability of neuronal cells in the pathogenesis of Parkinson's disease. Protein & cell 2016, 7(2):114-129. (*通讯作者, IF=35.374,他引57)

(13)Zhu Y, Chen G, Chen L, Zhang W, Liu L, Feng D, Chen Q. Monitoring Mitophagy in Mammalian Cells, Methods in Enzymology 2014, 547: 39-55. (IF=2.194，他引18)

(14)Liu J, Mu C, Yue W, Li J, Ma B, Zhao L, Liu L, Chen Q, Yan C, Liu H, Hao X, Zhu Y*. A diterpenoid derivate compound targets selenocysteine of thioredoxin reductases and induces Bax/Bak-independent apoptosis. Free Radical Biology & Medicine2013,63: 485-494.(*独立通讯作者, IF=5.710,他引29)

(15)Zhu Y, Li M, Wang X, Jin H, Liu S, Xu J, Chen Q (2012) Caspase cleavage of cytochrome c1 disrupts mitochondrial function and enhances cytochrome c release. Cell Research 2012,22: 127-141 (IF=11.981,他引51)

(16)Ni B, Ma Q, Li B, Zhao L, Liu Y, Zhu Y*, Chen Q* (2012) Phenylarsine oxide induces apoptosis in Bax- and Bak-deficient cells through upregulation of Bim. Clinical Cancer Research 2012, 18: 140-151. (*通讯作者, IF=7.837,他引15)

(17)Zhao L#, He F#, Liu H#, Zhu Y#, Tian W, Gao P, He H, Yue W, Lei X, Ni B, Wang X, Jin H, Hao X, Lin J, Chen Q*. Natural diterpenoid compound elevates expression of Bim protein, which interacts with antiapoptotic protein Bcl-2, converting it to proapoptotic Bax-like molecule. Journal of Biological Chemistry 2012,287: 1054-1065.(*并列第一, IF=4.651,他引32)

(18)Zhao L, Zhu Y*, Wang D, Chen M, Gao P, Xiao W, Rao G, Wang X, Jin H, Xu L, Sui N, Chen Q*. Morphine induces Beclin 1- and ATG5-dependent autophagy in human neuroblastoma SH-SY5Y cells and in the rat hippocampus. Autophagy2010,6: 386-394 (*通讯作者, IF=6.6643,他引65)

(19)Zhu Y*, Zhao L, Liu L, Gao P, Tian W, Wang X, Jin H, Xu H, Chen Q (2010) Beclin 1 cleavage by caspase-3 inactivates autophagy and promotes apoptosis. Protein & cell 2010,1:468-477 (*通讯作者, IF=3.22,他引188)

(20)Zhu Y, Huang K, and Xu H. Mitochondrial Permeabiltiy Transition and Release of Cytochrome c Induced by Selenite. J Inorganic Biochemistry, 2002, 90:43-50 (他引47)

(21)Zhu Y, Xu H, Huang K, Hu W, and Liu M. A study on human urine in a high selenium area of china by 1H-NMR spectroscopy. Biol Trace Elem Res. 2002, 89:1-9(他引14)